Consulting services

Bioinformatician.net offers Companies and Research Labs consulting services to make them successful in completing their Bioinformatics projects, whether it is interpretation of data from large and diverse biological datases or development of software applications and pipelines to deal with such data. Our consultants are experts in the field and can generate results to advance the understanding of diseases and the development of drugs and diagnositcs. We leverage our experiences and existing code base to build innovative custom solutions for computational problems in biology, thereby saving time and money, while creating novel findings that can make an impact on patient's lives. Here's a snapshot of some custom applications we have built, when no commercial solutions existed.

We can take on bioinformatics software development projects that involve multiple team members including developers, testers and analysts. These are typically expensive undertakings with multi-million dollar budgets. We can save companies time and money by setting up offshore development teams. Please contact us for more information.

We can take on bioinformatics software development projects that involve multiple team members including developers, testers and analysts. These are typically expensive undertakings with multi-million dollar budgets. We can save companies time and money by setting up offshore development teams. Please contact us for more information.

We provide bioinformatics consulting services for various platforms. Click on one of the following platforms to understand how we can help:

  • Microarrays

    • Microarrays are an oligonucleotide probe based technology designed to query genes, SNPs and CNVs in samples, amongst other things. Probes bound to a surface hybridize to their intended targets to confirm or refute the existance of the modality of interest. The typical experiment creates a spotted image which is then processed to create a summary of targets and their intended scores or presence/absence call.

    Innovagene relies on internally developed workflows to analyze vast amounts of microarray data. We perform image processing algorithms and statistical analysis on resulting data to uncover biomarkers and signatures that are relevant for driving sample states. Some of our processes include normalization, transformation, clustering and enrichment analysis.

    Please contact us if you need help with microarray data analysis. We also offer training courses on Gene expression analysis and SNP genotyping analysis.

  • DNA Sequencing

    • With the advent of genome sequencing technologies that produce vast amounts of data, the problem of data management as well as analysis now requires special tools and processes. Innovagene is a leader in this space and has helped several customers analyze exome-seq, rna-seq, chip-seq and whole-genome-seq data. We use both open source and commercial tools to solve challenges in the NGS space.

    Please contact us if you need help with NGS data analysis. We also offer training courses on NGS.

  • HPLC Metabolomics

    • Metabolomics is a high throughput technology that uses High Pressure Liquid Chromatography (HPLC) to measure the abundance of metabolites in a sample of interest, and then study chemical processes that metabolites affect. The goal is to understand the role of these metabolies, identify patterns or signatures for diagnostics use.

    Innovagene relies on internally developed workflows to analyze vast amounts of metabolomics data. We perform statistical analysis on resulting data to uncover biomarkers and signatures that are relevant for driving sample states. Some of our processes include normalization, transformation, clustering and enrichment analysis.

    Check out our product, Metabolyzer and contact us if you need help with metabolomics data analysis.

  • MALDI-TOF Proteomics

    • Proteomics is a high throughput technology that uses Mass Spectrometry to measure the abundance of proteins in a sample of interest, and then study biochemical processes that proteins affect. The goal is to understand the role of these proteins or their chemical modifications (such as phosphorylation, ubiquination, methylation, etc) to identify patterns or signatures for diagnostics use.

    Innovagene relies on internally developed workflows to analyze vast amounts of proteomics data. We perform statistical analysis on resulting data to uncover biomarkers and signatures that are relevant for driving sample states. Some of our processes include parsing sample files, clustering and enrichment analysis.

    Check out products we've developed for our customer at Harvard, NakedQuant and Protein Modification Quantifier.

    Please contact us if you need help with proteomics data analysis.

We have experience in the following technology areas

We have experience in the following application areas